rs33693207 SNP Detail

Summary

• ID
  rs33693207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86348318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG GGCTATGTGA GTACAGGGCC
  R
  TCTAGAGCTA TGTGGCAAGA CTGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46307188	mCV23664560	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss136756087	ENSMUSSNP4998665	ENSEMBL	ENSEMBL_Sanger	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33693207					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86348318 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22101	CpG island 22101	1148 bp distal
Cpgi22102	CpG island 22102	652 bp proximal
Dop1a	DOP1 leucine zipper like protein A	876 bp upstream
Rr684095	regulatory region 684095	1326 bp distal
Rr684096	regulatory region 684096	825 bp distal
Rr684097	regulatory region 684097	1286 bp distal
Rr684098	regulatory region 684098	399 bp proximal
Rr684099	regulatory region 684099	816 bp proximal
Rr684100	regulatory region 684100	900 bp proximal
Tssr2956	transcription start site region 2956	1694 bp upstream
Tssr86391	transcription start site region 86391	898 bp upstream
Tssr86392	transcription start site region 86392	908 bp upstream
Tssr86393	transcription start site region 86393	959 bp upstream
Tssr90780	transcription start site region 90780	1322 bp upstream
Tssr90781	transcription start site region 90781	1307 bp upstream
Ube3d	ubiquitin protein ligase E3D	1315 bp upstream