rs33693608 SNP Detail

Summary

• ID
  rs33693608
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:97204542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTCTAG GAGACAGACA
  GCATTTTCTT TCTCTTGAGT CCAAGTGAGG GGGATTATTT CTTGTGTCTT TTTAAAGAAC
  TGGATCTGGG TTTTGTACAA AACCCTGTGA GAACATTGCT CTCTGTGCAC TCTCAGTCGT
  AATGCTGTCC CTTAAGTCTC CTGTACTTCC AGCTTGGCAG GCTGACGTTT CAACAGCTAT
  R
  GCTGCCTGTA TTGTTTTCTT TATTAGCTTT ATTGAGCTGA TATTCTGAGG TGGATACTTA
  GAAGGAAACC AGATGACTGA TGTGGTCATC TGTAATAATC AACTGTGTCT GTATTTTGTA
  GAATGAATAG TAATTTAGAG ATAATTTCAT TATTTGGAAT GAATTATATT TTTCTATTAT
  AGAATAACAG ATACCATTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45810024	mCV25011111	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148886319	ENSMUSSNP1558404	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33693608					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:97204542 () rs orientation: forward

Symbol	Name	Function Class
Bmp2k	BMP2 inducible kinase	Intron
Rr399178	regulatory region 399178	662 bp downstream
Rr615014	regulatory region 615014	691 bp distal
Rr615015	regulatory region 615015	807 bp distal