rs33693850 SNP Detail

Summary

• ID
  rs33693850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33855686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTCACTTT GTAGACCAGG CTGGCCTCGA ACTCGAAATC
  CGCCTGCCTC TGCCTCCCAA GTGCTGGAAT TAAAGGCGTG CGCCACCACT GCCCGGCTTC
  R
  TTGTATTTTT ACAAGGCACT GCAACAATAG CCTTAAACTA CCAGACTTTC CAATCCTCCT
  GCTTTTAACT CCCAAGTGCT GTTTTATGAG ATTCTAGAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39567483	mCV24098518	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss325366932	CHEV_17_33773657	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33693850					SNP	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33855686 () rs orientation: forward

Symbol	Name	Function Class
Gm20507	predicted gene 20507	within coordinates
Pram1	PML-RAR alpha-regulated adaptor molecule 1	1344 bp upstream
Tssr143785	transcription start site region 143785	1088 bp upstream
Tssr143786	transcription start site region 143786	1109 bp upstream
Tssr143787	transcription start site region 143787	1377 bp upstream
Tssr143788	transcription start site region 143788	1408 bp upstream
Tssr143789	transcription start site region 143789	1418 bp upstream