rs33694410 SNP Detail

Summary

• ID
  rs33694410
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7016067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAACAAA CCTTGTCATT
  TCCTATGGGT TCTACTTCAA GCGGATAACA GCTAGGCTGG AGTCTGGGGG TGGGATTCAG
  TGGCTAAAGA CACATTGGGG CAGGGTGGCT CTTGCTTTGG AAGTAAAAGC TGGGTCAGAA
  ACACAAGGCA GCCTCCGAAG ACCACAAGAG GGCTTTTAAG CATGGCAGGG CTTCGTGGGC
  M
  CGGCAGTGGC GACCCAACTT AATCCACCGC TCGCGGCACT CAGATGCGGT GTGTTCTCTC
  ACCTCACCAT CCCCGTGGGA TTCAGAACTT TCAGCAGTAT GGCTTTGTCG ACAGGTCTAA
  GCACACTTGA AATATAGCTA CGGACTGACC CGGTCACCAT TTCTATCTTT GTCCCCCTCA
  CAGGGAAGAG CCAAAGCATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48344175	NES12258344	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33694410					SNP	C	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48344175	NES12258344	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7016067 () rs orientation: forward

Symbol	Name	Function Class
Ezr	ezrin	within coordinates
Rr332781	regulatory region 332781	1334 bp proximal
Rr342727	regulatory region 342727	within coordinates
Tssr146323	transcription start site region 146323	1848 bp upstream
Tssr146324	transcription start site region 146324	1800 bp upstream
Tssr146325	transcription start site region 146325	1776 bp upstream