rs33694411 SNP Detail

Summary

• ID
  rs33694411
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7016004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACACACTG TCATATACAC
  ACACCTAAAC TAAAAAACAA TAATAAAAAA AGAAACAACA ACAACAAAAC AAACCTTGTC
  ATTTCCTATG GGTTCTACTT CAAGCGGATA ACAGCTAGGC TGGAGTCTGG GGGTGGGATT
  CAGTGGCTAA AGACACATTG GGGCAGGGTG GCTCTTGCTT TGGAAGTAAA AGCTGGGTCA
  R
  AAACACAAGG CAGCCTCCGA AGACCACAAG AGGGCTTTTA AGCATGGCAG GGCTTCGTGG
  GCACGGCAGT GGCGACCCAA CTTAATCCAC CGCTCGCGGC ACTCAGATGC GGTGTGTTCT
  CTCACCTCAC CATCCCCGTG GGATTCAGAA CTTTCAGCAG TATGGCTTTG TCGACAGGTC
  TAAGCACACT TGAAATATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48344176	NES12258342	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33694411					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48344176	NES12258342	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7016004 () rs orientation: forward

Symbol	Name	Function Class
Ezr	ezrin	within coordinates
Rr332781	regulatory region 332781	1397 bp proximal
Rr342727	regulatory region 342727	within coordinates
Tssr146323	transcription start site region 146323	1785 bp upstream
Tssr146324	transcription start site region 146324	1737 bp upstream
Tssr146325	transcription start site region 146325	1713 bp upstream