rs33694412 SNP Detail

Summary

• ID
  rs33694412
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7015479 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTACTTT TCGCTTTATA
  AAACCATGCC TTTTTTTCCA TAAGGGCCTT CCTCACAGAG AAGCCACTGA TCCATGAGGT
  GCACAGGGAT GGGGCTGGAT TCCACACCCC TGGCTCTCAT TCTATCGAGG CACACACTCC
  CACCTGGCTG GATGCTGTCC GTGTCTCCAG CCTACTCTCC AGCACTTTAC CAGAAGTAAT
  R
  GCAATCCGGA AGTAAGGACA AACTCTCAAA CCACAAGCTC TGCCATCAAA AGCTGTCCTG
  GGCTGAGGAG ACGGCTCAGT GGGCAAGAGC CTTCTTGGCA CAAGTGTGAA AAACCTGAGT
  TGAGAGTTCA AATCCACAGA AGTCATATAA AAAGCATCGC TACCCAGCAC TGCGGCTGTG
  GAGACAAGAC TGCCGAGTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48344177	NES12258404	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33694412					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48344177	NES12258404	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7015479 () rs orientation: forward

Symbol	Name	Function Class
Ezr	ezrin	within coordinates
Rr332780	regulatory region 332780	1879 bp distal
Rr332781	regulatory region 332781	1922 bp proximal
Rr342727	regulatory region 342727	within coordinates
Tssr142477	transcription start site region 142477	1788 bp downstream
Tssr142478	transcription start site region 142478	1764 bp downstream
Tssr146323	transcription start site region 146323	1260 bp upstream
Tssr146324	transcription start site region 146324	1212 bp upstream
Tssr146325	transcription start site region 146325	1188 bp upstream