rs33695054 SNP Detail

Summary

• ID
  rs33695054
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92477896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATC TGCATCCTGT GCCCCACTGT
  S
  GTTGTTTTGT TTTGTTTTTA TGTAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45809856	mCV23365545	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss148831537	ENSMUSSNP4527414	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss321612284	CHEV_5_92759063	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33695054					SNP	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92477896 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	1790 bp upstream
Cxcl9	C-X-C motif chemokine ligand 9	1958 bp upstream
Tssr47295	transcription start site region 47295	1756 bp upstream
Tssr47296	transcription start site region 47296	1781 bp upstream
Tssr47297	transcription start site region 47297	1791 bp upstream
Tssr51875	transcription start site region 51875	1972 bp upstream
Tssr51876	transcription start site region 51876	1951 bp upstream