rs33695242 SNP Detail

Summary

• ID
  rs33695242
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134679622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTA AAATTAACTA GCTTTTTTGG
  S
  TATATATATA TATATATATA TATAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45310324	mCV27542885	ABI	CRAMUS_MOUSE	f	SNP	G		C	C
ss147637382	ENSMUSSNP1099892	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss320514836	CHEV_2_134663438	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33695242					SNP	G	C	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134679622 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565690	regulatory region 565690	1467 bp distal
Rr565691	regulatory region 565691	1302 bp distal
Rr565692	regulatory region 565692	562 bp proximal