rs33697528 SNP Detail

Summary

• ID
  rs33697528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50800112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGCCTGGG TGGTTACCTA TGACAACTTT ACAATGATGG
  AGTGATTTCA ATGGGCAAGG GTAAAGTTTG CTAAGCAAGC ACTGACATGG GGGGGGGGGG
  R
  AGAAACTTGT ACTTTTCCAA GGCTGGCAGA GCTGCGCACA TGCACAGTGA GGGTTCTGTG
  CCCCCAGTCC TATACATACC ACATACCCTC AGCCTCACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46307701	mCV25210031	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss136483625	ENSMUSSNP4693060	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss322960495	CHEV_9_50696917	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33697528					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50800112 () rs orientation: forward

Symbol	Name	Function Class
Gm25558	predicted gene, 25558	757 bp downstream
Ppp2r1b	protein phosphatase 2, regulatory subunit A, beta	within coordinates
Rr195477	regulatory region 195477	112 bp distal
Rr209487	regulatory region 209487	within coordinates