rs33698998 SNP Detail

Summary

• ID
  rs33698998
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50619606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACACATA CTGACACTGC
  TTCCATGTTC ATGGAATACC TCTGGAAATA ACGGAAATAA CCCTGGCTGC CAGGATGGAG
  GATGGGTAAC TGTGGTGGCT AACATTGATT ATCTATCAAT GTGACAGGAT ATAGAAAATC
  ACGTAGGAGA CAAGTCTCTC CGCTGAGGAA CTATTTACAT TAGGTTGGCC TCTCTGGCCA
  Y
  GTCTGGGAGA GGATTTCTTA ATTAAGTTAA CTGAGGTGGG AAGAAACCCA TAAGCAGGCA
  GCACCATTCC TGGGCTTGGG CCCTGGGGAA GAGAATGAGC TGAGCCCAGC ATTCACTGTT
  CTCCCCTCTG GATGTGGCCG CAACCTGACC CAGCTGCCTC AAAGGCCCTC ACCACTCCTC
  CCCCTCACGC AGGACTTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46307264	mCV25205320	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136479799	ENSMUSSNP1773412	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33698998					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50619606 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1636 bp downstream