rs33699365 SNP Detail

Summary

• ID
  rs33699365
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54568520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCGAA CTTTTCGGTC ATTGCCTGCC
  Y
  GCTCCTACCA TATACCAGGT CACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46307452	mCV24161047	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss136506914	ENSMUSSNP2366832	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss322965578	CHEV_9_54509043	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33699365					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54568520 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Tssr89653	transcription start site region 89653	430 bp downstream
Tssr89654	transcription start site region 89654	608 bp downstream
Tssr89655	transcription start site region 89655	648 bp downstream