rs33703214 SNP Detail

Summary

• ID
  rs33703214
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:90907508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGGG TCCCAGGAGC GGGGAAAGGG
  R
  CTCTTCCAGC ATCCTCCTAT AATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45810851	mCV23119058	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148817092	ENSMUSSNP3923342	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321608244	CHEV_5_91188675	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33703214					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:90907508 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16042	CpG island 16042	within coordinates
Cxcl5	C-X-C motif chemokine ligand 5	within coordinates
Gm72413	predicted gene, 72413	within coordinates
Rr614399	regulatory region 614399	1060 bp distal
Rr614400	regulatory region 614400	261 bp distal
Tssr47178	transcription start site region 47178	282 bp downstream