rs33704451 SNP Detail

Summary

• ID
  rs33704451
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9908909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGCATACGG ACAGCATTGC
  CTCTGAATGA GTGTGGTAGA GATGAAGCCA CGGGCATCCT GCTGCTGAGT GTGTGTGTGT
  GCAGATGCCC CAGATTTTTA AAGACACTCT CTGCGTTGAG GGCAGAGATA ACAGATGTTC
  TGGATCTCTC CGATCTCCCC TTTCAAATCT CACAGATGGA AAGAAGCCCG TAAGCAGTTC
  Y
  ATTCCTTAGG ATGAAGCTAG ATGAGAGCAG ATGATTATAT CTGGGTACTC TGATGAGGAA
  ACATCGTTTA TGAAAAAAAT AATTTATCAT TGATGAGAAA ATAATTTTGA GGGGGTGGGG
  GTTAAGCCTA CCATCTCAAG CATATTTCCT ATAGGAAATC CACCGACCAA ATATAGATTG
  AAGATACCGG AGGGTGGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48346020	NES12261505	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33704451					SNP	T	T	T	T	T	T	T	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48346020	NES12261505	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9908909 () rs orientation: forward

Symbol	Name	Function Class
D17Mit97	DNA segment, Chr 17, Massachusetts Institute of Technology 97	1158 bp distal
Rr392258	regulatory region 392258	564 bp upstream