rs33705166 SNP Detail

Summary

• ID
  rs33705166
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164329107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC TTTCTGGAGT CCTCGTCTGC
  K
  GCTCCCTTCT CCCTTCTCTG GCAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45311527	mCV23737646	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss148225445	ENSMUSSNP1931980	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320606019	CHEV_2_164312687	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33705166					SNP	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164329107 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12662	CpG island 12662	within coordinates
Dbndd2	dysbindin domain containing 2	within coordinates
Gm10725	predicted gene 10725	724 bp upstream
Gm20458	predicted gene 20458	within coordinates
Tssr21598	transcription start site region 21598	1092 bp downstream
Tssr21599	transcription start site region 21599	532 bp downstream
Tssr21600	transcription start site region 21600	289 bp downstream
Tssr21601	transcription start site region 21601	916 bp upstream
Tssr21602	transcription start site region 21602	1010 bp upstream