rs33705325 SNP Detail

Summary

• ID
  rs33705325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9908566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGCG CCTCTCTCTC
  TCTCTCTCTC TCTCTCCCTC CCCCCTCTTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTCTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TAAAATGTGT AATAGGTGAG
  TGTCCCCAGG GCTTTACCAG GACAGAAGTG TGATCTGATT GGTTGACTGA GTTATGTGAC
  R
  TGCCCAACTT TGAGCAAGGC CACCTTGCTC TGGCTGGACT GCATTTTGTC TTCTCTGCCC
  TAGAATTGAT GGCTTTAGCA GTGTGCTGGG GAGAGCACAT TAAGTAAAGC CCTTCAGCCA
  GAATGAGCTC CTTGGTACAT CCACGCATAC GGACAGCATT GCCTCTGAAT GAGTGTGGTA
  GAGATGAAGC CACGGGCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48346024	NES12261498	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33705325					SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48346024	NES12261498	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9908566 () rs orientation: forward

Symbol	Name	Function Class
D17Mit97	DNA segment, Chr 17, Massachusetts Institute of Technology 97	815 bp distal
Rr392258	regulatory region 392258	907 bp upstream