rs33706889 SNP Detail

Summary

• ID
  rs33706889
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:75189804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT AACAGTTCCA GCAACTGGAG
  R
  CTAAGTATTC AAATATATGA GCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45311893	mCV25094012	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146766335	ENSMUSSNP5256577	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss320350069	CHEV_2_75197517	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33706889					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75189804 () rs orientation: forward

Symbol	Name	Function Class
Gm32927	predicted gene, 32927	612 bp upstream
Gm39857	predicted gene, 39857	within coordinates
Igs15	intergenic site 15	within coordinates
Rr559472	regulatory region 559472	1767 bp distal