rs33707069 SNP Detail

Summary

• ID
  rs33707069
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147019401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT TATGAAGAAA GGCTCTAAAT
  Y
  ACCCCAGATA AAGAAAAACA GAAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45310875	mCV22638141	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147881190	ENSMUSSNP890995	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320548154	CHEV_2_147003217	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33707069					SNP	T	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147019401 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12376	CpG island 12376	812 bp proximal
Cpgi12377	CpG island 12377	1161 bp proximal
Nkx2-2	NK2 homeobox 2	65 bp downstream