rs33707737 SNP Detail

Summary

• ID
  rs33707737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:68757920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATTCATT CCTCCAAGGT
  TCTCTTCACT GCAGCATGGG CAGAGAGACA CAGAGGAAGG CCCTTCTTGT TTCCCGAGGG
  ATTTTTACAA TCTTTCCTCA GATGCTCCAG TTTTCTACAA CCAGAATGTG CAGCTTGGTT
  CCCCTGAGAA CGCTTTTTAT TCTCACAGGT GTTCTTAAAA TTGGCGCTGA ATTTCTGTCC
  Y
  TTTATCATGT AGGCCTTTAC TACGATGTAA TTATTTGAGA TCTCTTGTGG CTCTAAATGC
  CCTTTTAATT TTCTTGCTAC ATCCCACAGA TTCTCATGTT TCCTCTTCAT TGGATCCCAG
  GACATTGCCA TTTCCTAGGA CAAGCCTTCA ATGAATCATT AATCAGTGCA AGGTCATTGC
  TCAAGCTCAG ATTTTTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39568491	mCV23702748	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss145867361	ENSMUSSNP1747047	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss325435139	CHEV_17_68800265	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33707737					SNP	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:68757920 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D17Mit185	DNA segment, Chr 17, Massachusetts Institute of Technology 185			505 bp proximal
L3mbtl4	L3MBTL4 histone methyl-lysine binding protein			Intron
				Noncoding-Transcript-Variant