rs33707754 SNP Detail

Summary

• ID
  rs33707754
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:50144687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCAAAAA TAATAATATA
  AAAATTGACC TTAATTTGTG GTTGAAGAAT ATATATATAT ATATATATAT ATATATATAT
  ATATATATAT ATATATATTA GATACAGAAT AAGAGAGGAA ATATGAGTTA AATGAAAATT
  GTGTTCAAGT GAAATTGATA GACTTAATTA ATCTTTTTCA AATATAAGAA AAACAGATCT
  S
  TACACATAGA TTCATGTAAT AGAAAACAGG AAGGAAAACA TGATACAATT GAAAATCATA
  CATTATGATA AAACTCTCTA GTTTTGTCTT GAATAGTATC ATGTAGCAAC ATCCTATATC
  TAAAAAGGTG AGCCCTTATT AAGACATCTG AAAGACTAAA AATATATGAG TAAATCCACA
  TTTTAATGAT TCTAAAATTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47331454	NES11015417	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33707754					SNP	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47331454	NES11015417	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:50144687 () rs orientation: forward

Symbol	Name	Function Class
4933411E06Rik	RIKEN cDNA 4933411E06 gene	1942 bp upstream