rs33708642 SNP Detail

Summary

• ID
  rs33708642
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:50148385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAACATCAA GGAGACAAAG
  AAAGACTTCA CACATTGAAG TGTAGCTCAC ATACAGAAGT ATTCAATATT GCTCTTATAC
  CTAAAGTAAT GAGAATTTCT TCACTTTATT TTGTAAATAT ATGCCTTGTA GAAATGAGCA
  TTTTCCCTTA TAGACAAGTA TTTCCTCTTT TTTATGTTTG AAATTTCTGT TGCAGACATT
  R
  GAGATAGTTT TAAGGGAATA ATTTTAAACA AGTGCATAAT AAAAATAATT AATAAAATTT
  AGTGATAAAG AAGTTGTTGA GAACATGTAG AAAACAATGT GTCTTACTTA GAAAATGCCC
  ACCATTGTGT TTAACAAGTT TTATGAAGAA CTAGTTAATC TGAGGTTATT GAGGTATAAT
  ATTCCATGAC AAAATGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47331472	NES11015288	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33708642					SNP	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47331472	NES11015288	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:50148385 () rs orientation: forward

Symbol	Name	Function Class
4933411E06Rik	RIKEN cDNA 4933411E06 gene	within coordinates