rs33709195 SNP Detail

Summary

• ID
  rs33709195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:50148456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTATACC TAAAGTAATG
  AGAATTTCTT CACTTTATTT TGTAAATATA TGCCTTGTAG AAATGAGCAT TTTCCCTTAT
  AGACAAGTAT TTCCTCTTTT TTATGTTTGA AATTTCTGTT GCAGACATTA GAGATAGTTT
  TAAGGGAATA ATTTTAAACA AGTGCATAAT AAAAATAATT AATAAAATTT AGTGATAAAG
  R
  AGTTGTTGAG AACATGTAGA AAACAATGTG TCTTACTTAG AAAATGCCCA CCATTGTGTT
  TAACAAGTTT TATGAAGAAC TAGTTAATCT GAGGTTATTG AGGTATAATA TTCCATGACA
  AAATGTGGTC ATTGAAAGTA TTGTTGTTTT GTATTGTCTC ACATTAAAAT GTGTATAATT
  TTATCTATAA AATATGTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47331475	NES11015289	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33709195					SNP	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47331475	NES11015289	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:50148456 () rs orientation: forward

Symbol	Name	Function Class
4933411E06Rik	RIKEN cDNA 4933411E06 gene	within coordinates