rs33709999 SNP Detail

Summary

• ID
  rs33709999
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:26197430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAAAGATG TGAAGTTGAG
  TATATAGGAA TTTTCTATTT TCTAAGCTAC TTTAAGTTTA AAATTACTTG AAAACAATTT
  TTTTTTGAAC AAGTACACAA TAGCCAGAAA AGAAGGAGTT GCTGAGCAAA TCTTGTGATG
  GGGGCATCCT GTATGCTAAG GATATAGCCT ATATATTAAG GATACTTCCT TTCTGCTAGG
  R
  ATACATCAGG TTTTAAATCA AATCTCTCTT CCCTCATGTG TGCACTGGTA AAAAAACAAT
  TCATCAGAGA CCATGATGTG CAGGTACAGA GGGCAGAACA AAAATTAGAG TCAGGGTAGG
  GCTCTCAGGG ATGGCCTGGG CTAGTCACCC AGGTGGAAAG CCAGAAGGTA AGCCAAGTGG
  GAGACATATA TTTCTCCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47832129	NES11951967	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33709999					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47832129	NES11951967	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:26197430 () rs orientation: forward

Symbol	Name	Function Class
L3mbtl3	L3MBTL3 histone methyl-lysine binding protein	within coordinates