rs33710607 SNP Detail

Summary

• ID
  rs33710607
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:181032884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCACTAAG ACACACACAC AGGTGGACAA AGCGATTCAG
  CCATCACTCA CCCTGCCCAC TAGAGCAGAG CCCCTAGGAG ATCCAGGCAA AGTCTTTATC
  R
  GGCTCCCCAG AGGGGCTGTG AGGCCCCTGT GGAGAGTCTT CATCATCCTT GTCATCCCCC
  AGCAGTGCAT CCTCATGGGC CAAGCCCACG TCATCCTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45312091	mCV23775300	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss148399577	ENSMUSSNP1225856	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33710607					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181032884 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr572990	regulatory region 572990			1439 bp proximal
Rr572991	regulatory region 572991			1681 bp proximal
Rr572992	regulatory region 572992			1907 bp proximal
Zbtb46	zinc finger and BTB domain containing 46			Coding-Synonymous
				Intron
				Noncoding-Transcript-Variant