rs33712734 SNP Detail

Summary

• ID
  rs33712734
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75931565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCCTCTAG GGCAGTGGTT ACTTCTTTGG GGGTTGAACA
  TCCCTTTCAC AGGGCTCACA GATCAGATAT CCTGTATATC AGGTATTTAC ATGATGATTC
  R
  TAACAGTAGA AAAATAACAG TTATGAAGTA GCAACAAAAT AATTTAATGG TTGGGGGTCC
  CCACGACTTG AGGAACTGTA CCAAAGGGTC GCAGCATTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45312010	mCV23800058	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss146770247	ENSMUSSNP1292635	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320352654	CHEV_2_75939278	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33712734					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75931565 () rs orientation: forward

Symbol	Name	Function Class
Pde11a	phosphodiesterase 11A	Intron
Rr559649	regulatory region 559649	781 bp distal
Rr559650	regulatory region 559650	670 bp proximal