rs33714464 SNP Detail

Summary

• ID
  rs33714464
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66213144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGAAGAT CCATAGCACT TTGGGGTAAA
  CACACTCCAT CTCTCACCTG AGGCAGACCC TCAGCCAAGA TGGCTCTGCA AGTAAGAGTT
  AGGAAATCGG GGGGAGGGGG GAGAGAAATT GAGGTTtgtg tgtgtgtgtg tgtgtgtgtg
  W
  gagagagaga gagagagaga gagagagaga gagagagTCT TCACACCATG TGATACCCAA
  TACTCTCTGA ATGAGTGTGA AAGTAAGCTT CAAAGCCTAA AGAGAAATGA AAACCTGCCA
  GCCTCCTAAC GTAACATTTC Aggctggggc                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45812163	mCV24261504	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss321562615	CHEV_5_66447040	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33714464					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66213144 () rs orientation: forward

Symbol	Name	Function Class
Rbm47	RNA binding motif protein 47	within coordinates
Rr113965	regulatory region 113965	344 bp distal
Rr113966	regulatory region 113966	857 bp proximal
Rr123026	regulatory region 123026	1842 bp proximal
Rr125274	regulatory region 125274	1143 bp distal
Rr129750	regulatory region 129750	within coordinates
Rr129751	regulatory region 129751	840 bp proximal
Tssr51170	transcription start site region 51170	1240 bp upstream