rs33715487 SNP Detail

Summary

• ID
  rs33715487
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:143381294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCAGGAA TGGTGGTTCA
  GGCCTTTGAT GTCAGCACTC AGGAGGCAGA GGCAGGGGGA GCTCTGTGTG TGAGGCCAGC
  CTGGTCCAGG ACAGCCAGGG TTACACAGAG AAACTGTGTC TCAAAAGGAG GAGGAGGAAG
  AAGAGGAGGA GGAGGAAGAG GAGGAGAAAG AAGTCACAGT TTATTCAGAA GGCAGAGGCA
  R
  GGGGACAGAA ATTTCAAGGC CTACCTAAGT AACTTACTGA GACTCTATCT TTAAACTAAA
  AGCTAAACAG GAGGAGAGAG AAGCTAGAGA CGGAAAGCAA AGTGCTTAAC TAGAATGATG
  GGGCCCTAAT GTCCACTCAC AAGGACTACA AAAAAATTTG TTTTTAAATA AAATAAAATC
  TCTGTGAGAT CCACAGATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45812178	mCV22531014	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss144597655	ENSMUSSNP2822505	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33715487					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:143381294 () rs orientation: forward

Symbol	Name	Function Class
9530056K15Rik	RIKEN cDNA 9530056K15 gene	within coordinates
Gm20635	predicted gene 20635	within coordinates
Gm43398	predicted gene 43398	within coordinates
Rr111076	regulatory region 111076	894 bp distal
Rr111077	regulatory region 111077	107 bp proximal
Rr131099	regulatory region 131099	83 bp proximal