rs33716287 SNP Detail

Summary

• ID
  rs33716287
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118714713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGT AGGTCCTCCT AAGGATACTG
  Y
  TTTAATGTGC ATAATTGTCA TTTAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45312457	mCV22801961	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147316296	ENSMUSSNP2852071	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320472461	CHEV_2_118709968	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33716287					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118714713 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12096	CpG island 12096	438 bp distal
Ivd	isovaleryl coenzyme A dehydrogenase	1325 bp downstream
Rr397218	regulatory region 397218	1069 bp downstream
Rr397219	regulatory region 397219	396 bp downstream