rs33717802 SNP Detail

Summary

• ID
  rs33717802
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118786841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT TTTTCCCTAT TACATTCTTT
  Y
  TTTTGCTTTG ATGCTAGGTA CCATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45312728	mCV23830382	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147317894	ENSMUSSNP747610	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320472775	CHEV_2_118782096	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33717802					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118786841 () rs orientation: forward

Symbol	Name	Function Class
Rr563384	regulatory region 563384	978 bp distal