rs33718640 SNP Detail

Summary

• ID
  rs33718640
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:138554164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTACTGGTT AGTTCATAAT GTTGTTCCAC CTATAGGGTT GCAGATCCCT TTAGCTCCTT
  GGCTACTTTC TCTAGCTCCT CCATTGGGAG CCCTATGATC CATCCATTAG CTGACTGTGA
  GCATCCACTT CTGTGTTTGC TAGGCCCCGG CATAGTCTCA CAAGAAACAG CTACATCTGG
  GTCCTTTCAA TAAAATCTTG CTAGTGTATG CAATGGTGTC AGTGTTTGGA TGCTGATTAT
  GGGGTGGATC CCTGGATATG GCAGTCTCTA CATGGTCCAT CCTTTCATCT CAGCTCCAAA
  M
  TTTGTCTCTG TAACTCCTTC CATGGGTGTT TTGTTCCCAA ATCTAAGGAG GGGCATAGTG
  TCCACACTTC AGTCTTCATT CTTCTTGAGT TTCATGTGTT TAGCAAATTA TATCTTATAT
  CCTAGGTTTG GTATCCTGTC CTTTTCAAGC TGACTAGGGA TGCAGGGAGG AGTTTGTTTG
  GGTGCAGAGG GAAACTTCAG AAAAAGAGAA AGCCCAAAGA TTAAAAAAAA AAAAAAAAAC
  AAGGACCTGG CAACATCATA ATGAAAAAGA TGAGAGGAAA AAACACGACT CTGACTTTTA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45812918	mCV24572729	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33718640					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:138554164 () rs orientation: forward

Symbol	Name	Function Class
D5Dcr15	DNA Segment, Chr 5, Derry C. Roopenian 15	1180 bp proximal
D5Mit31	DNA segment, Chr 5, Massachusetts Institute of Technology 31	1072 bp proximal