rs33719855 SNP Detail

Summary

• ID
  rs33719855
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:139806986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGG CCTGCCCTGT GTGCTGCTCA
  Y
  TTGATCACTG GGGGCAGGGT GGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45813888	mCV25354599	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss321706321	CHEV_5_140297185	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33719855					SNP	T	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:139806986 () rs orientation: forward

Symbol	Name	Function Class
Gm26938	predicted gene, 26938	within coordinates
Tmem184a	transmembrane protein 184a	1261 bp upstream
Tssr49531	transcription start site region 49531	1129 bp downstream
Tssr49532	transcription start site region 49532	1079 bp upstream
Tssr49533	transcription start site region 49533	1115 bp upstream
Tssr54187	transcription start site region 54187	1299 bp upstream
Tssr54188	transcription start site region 54188	1258 bp upstream