rs33722489 SNP Detail

Summary

• ID
  rs33722489
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:57240480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TCTTTTTATT CCTCTCTCCC
  R
  CGCTGGAGAA CCTGTTAACT GATTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46311027	mCV25230562	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss136518554	ENSMUSSNP4233386	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss322972047	CHEV_9_57181004	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33722489					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:57240480 () rs orientation: forward

Symbol	Name	Function Class
Gm5121	predicted gene 5121	931 bp upstream
Tssr85298	transcription start site region 85298	869 bp upstream