rs33723304 SNP Detail

Summary

• ID
  rs33723304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152608042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACACAGA GCCCCACTAG
  ATTGTGTTCC AAGCAGGATG GGGTAGCGTC GGTGTTTGGG TCGTCCAAGG AAAGGATGCT
  AAGAAGGAAT TAGTCATATG AGATTTGAGG GCAATGATTG TGCGGGATGG AGCTGGAGGG
  AATGATAGTC CCTTAGTCTG ACACCTGGGG TGGGTGGAGA CCCAGAGCAC TGGAGGTGGG
  R
  CATCCTTAAA CCCAGGGTCT CTACACAGTG GTTTAAATAG GCTGATTGGG CAGGGAATGC
  GGCTACTGAG CATGTACAAG ACCCTGGGTT CAACTTCTAG TATTCCCCCC AAAAGAAACA
  AAACAAAACA AAGAAACAAA AAACAACCGG GGTCTGATTA ATACAGAAAA GATCACGCTT
  ACACAGGAAG GTAACAAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45313631	mCV27575122	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss147974105	ENSMUSSNP1099067	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33723304					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152608042 () rs orientation: forward

Symbol	Name	Function Class
Cox4i2	cytochrome c oxidase subunit 4I2	1085 bp downstream
Cpgi12465	CpG island 12465	340 bp proximal
Rr567459	regulatory region 567459	446 bp distal
Rr567460	regulatory region 567460	196 bp proximal
Rr567461	regulatory region 567461	545 bp proximal
Rr567462	regulatory region 567462	1373 bp proximal
Tssr26855	transcription start site region 26855	748 bp upstream