rs33723595 SNP Detail

Summary

• ID
  rs33723595
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24600213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAAATAGAT AAACACATAC GTGCATTTAA AAAAAAATTT
  TAAAGTAGGT CCTAGCTAGA ATCTACTGTG AATTCAAGGC CAGGCTGGTC TATAGAGAGC
  K
  CCAGGTCAGC CCAACTATAC AGTGAAATCT CAACAGCATC CACGTTAAGC CCGAGAGTTG
  CTAGGAATTT GAAGCCAGCA CGGACTACAT AGTGAGTTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45814034	mCV25442809	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33723595					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24600213 () rs orientation: forward

Symbol	Name	Function Class
Abcb8	ATP-binding cassette, sub-family B member 8	within coordinates
Cpgi15597	CpG island 15597	459 bp distal
Rr112283	regulatory region 112283	1613 bp distal
Rr112284	regulatory region 112284	988 bp proximal
Rr124925	regulatory region 124925	within coordinates
Rr398998	regulatory region 398998	1506 bp downstream
Rr398999	regulatory region 398999	745 bp downstream
Tssr45411	transcription start site region 45411	1551 bp downstream
Tssr45412	transcription start site region 45412	785 bp downstream