rs33725762 SNP Detail

Summary

• ID
  rs33725762
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:24779912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGGCACACA AGGTGTTTCA CTGAATATTG CTGGGAAAGG
  CTCTAAAAGA GCTGTAACAC TGAAATCCTT GGAGAACACC CCCGAATCTC CAACCCCACC
  S
  TGGTACTCAC TTCCCAACCA GACTGGGATC CTGAAGACCC CACCCCAAAG CTCTACCCAA
  TCTAGACTCC AATTCCAGGT TTCCTGGACA CCCTGAGGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45313672	mCV22669187	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	C
ss146374722	ENSMUSSNP4939885	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33725762					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:24779912 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ehmt1	euchromatic histone methyltransferase 1			Intron
				Noncoding-Transcript-Variant
Gm37139	predicted gene, 37139			within coordinates
Rr552926	regulatory region 552926			804 bp distal
Rr552927	regulatory region 552927			626 bp proximal