rs33729544 SNP Detail

Summary

• ID
  rs33729544
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102623871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATGCAAA CCTATATGAC
  TCTTTTTTTA CCCTGTATCC TCCTGACCCA TACTCTGCTT CTTAATCAAT AGTTTGCGTT
  TAGAGAGACG GTTCAGTAGG TAAAATACTT GCATACAAGC ATGAGGCCCT GAGCTTGGAT
  CCCCAGCAGC TTCATAGAGA ACAAAGCTTA ATGTCATATA CCTGGAATTC CACTTCTGCA
  R
  CTGTAGAGAC AGGAAGACTC CTGGCACTCA TTTGCAAGTC AGTCTAACTG ACAAGTAGTG
  AGCTCCAGGT TCAACGAGAA ACCCTGTCTT GAACAATAAG GAAGAGAAAC ATAAAACATG
  ACACTTGATA TTGATCTCTG GCCATGTACA CATGAGAGGC GGGAGGGAGG AAAGGTGGGA
  AGAGAGGAGG AAGAGTAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45314596	mCV25050058	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss147124362	ENSMUSSNP2946121	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33729544					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102623871 () rs orientation: forward

Symbol	Name	Function Class
Rr397151	regulatory region 397151	1756 bp upstream
Rr561738	regulatory region 561738	1438 bp proximal