rs33729684 SNP Detail

Summary

• ID
  rs33729684
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70582788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAAGGATA AGAAACAAAA
  CCAAGGGCTG GAGAGATGAC TCAGCGATTT AGAGCACTGA CTGCTCTTCC AGAGGTCCTG
  AGTTCAATTC CCAGCAACCA CATGGTGACT CACAAATATC TATAATGAGA TCTGACGCCC
  TCTTCTAGTG TGTCTGAAGA CAGCGACAGT GTACTCATAT AAATAAAATA AATAAATCTT
  W
  AAAAAAAAAA GAAAGAAAGG AAAAAAAAAG AGAGAAACAA ACCCAAAAGA TCAAATTCTA
  GGACGGATCA TATTTAAGAG GTAAAGAGAA GAAAGCCTTA GGGAAGTCAA AGAGAGAAAC
  ACAGCTCAGT GTCAGGAGGA AAGCAAGGAG AGAACAGAGC CCCAGAGAAC CCTGGGAGAG
  GGGAGATTTT GATAGTAAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46310954	mCV23565001	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss136608627	ENSMUSSNP1865970	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33729684					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70582788 () rs orientation: forward

Symbol	Name	Function Class
Rr197050	regulatory region 197050	413 bp proximal
Rr201554	regulatory region 201554	within coordinates