rs33732298 SNP Detail

Summary

• ID
  rs33732298
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22445284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTCTGGAC ACTCAGCACT TTCCAAGGAA TACCTCGCTT
  ACTGCAACAT CTTCCTGAGA TAGGCTTTGT TATCCTTTCT GTCTTGCAGG TAATAAAGCA
  R
  AAGCAAAAGT AGCTTGCTCA AGTAGAGTGT GCCATACTGC TTGGGTCCTA GAACTCCAAC
  GATGAATTGA AGGGAGGACA GATGCACATA TAGAAAAGCT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47834202	NES11685436	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33732298					SNP	G	A	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47834202	NES11685436	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22445284 () rs orientation: forward

Symbol	Name	Function Class
Rr379049	regulatory region 379049	within coordinates
Tssr59949	transcription start site region 59949	848 bp upstream