rs33732553 SNP Detail

Summary

• ID
  rs33732553
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180124906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGTTAGGTAG GTTGAGAACC ACTGTCCCAA ATAGAAACTC
  TTGCTCCTCA CCCCAATGCA CTTTAAGGGG TTTGTTGAGG GGGAGGGGAG CTGAAACATT
  R
  TTTTTCTGTG TAGCCTTGGC TGTCCTGAGA TCTGTAGACC AGGTTGTCTT CAAATTCACA
  GAGACCACCA TCCTCTGTCT GCCAAGTGCT AAGATTAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45313880	mCV25372007	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148392737	ENSMUSSNP5817261	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320632281	CHEV_2_180217818	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33732553					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180124906 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12896	CpG island 12896	478 bp distal
Rr48339	regulatory region 48339	1695 bp proximal