rs33734615 SNP Detail

Summary

• ID
  rs33734615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113619613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTCTCTC CTAACCTGCC
  TCTTCCTCAG TTCCAGTCGT TTCAGTCAGT TGTCCACAAG TTGCAGCGTG ACTTGATTTT
  TTTCTTCTCA TTAATCAGTC GTTTCTAACT CTGATACATG GACTGTGTCC TGCTTGCTTG
  CTTTTTCCAC CTTCACTATC AATACTTTAG GTCTCTCTCT CTCTCTCTCT ATATATATAT
  R
  TATATATATA ATTTATTTAT TTGTTGGTGA CACTTGGAGA AGTCCACTCC CATGCTTTCA
  GGTGTGTCTT TCTTCCCAAG CAACTTTTTT TTGTCTAGTA ACACTTCTGT TTTAAAATCT
  ACATTTAATA CTTCTATAAA GATTTCAACT CTGCTTCATT TTATATATAC CCCAACAGAT
  GAATTACACT GCCACCTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46312061	mCV23322800	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss136989707	ENSMUSSNP128929	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss323201090	CHEV_9_113699663	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33734615					SNP	A	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113619613 () rs orientation: forward

Symbol	Name	Function Class
Clasp2	CLIP associating protein 2	within coordinates
Rr198874	regulatory region 198874	613 bp distal
Rr205836	regulatory region 205836	1787 bp proximal
Rr207499	regulatory region 207499	1613 bp distal