rs33737212 SNP Detail

Summary

• ID
  rs33737212
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:44055027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTTTCCACC TCCCTCCCCC TTTGTTAGCC ACAGGCAGGG GAGAACCAGA GAGAAGGGGG
  AGGGGGTACA AAAGCTTGTG GTTGAAACCT ATGACAGTAT GACCGGCAGG CCTCAGGGTT
  CCACGGCCCC TCCCTGGATT CAAGCAGACC CTGTGATGGG CACCAGCCAC TTCATGCTTT
  ATGGTTGAAG CCTTCAAATG AAAGGACAGC CAAGTCTGAG GAGAGGCAGG AGGTTGAAGC
  TGGCTCAAGG TCCAGCAAAA CAAAAAGACA ACAAATGAAG CATCTCCTCT TCCCAGGAGC
  R
  TTCACTCCGC AACTCTGCTC CGCAGGGCAC TGCTCTCGGA GGTGGGTGAG TGGGCACCCA
  GAGCAGTTAT CTGAACACTA ACTGCTGCCT GGAACCAACC ACGTGCTGCC AGAATAAAAC
  AATGCTCTTT TCCAGGGAAA CCTCATGGCA GAGAAAGGAG ACTATAGGCA CCTAATGTGC
  CACCTCTCTA GCCAGACATC CTTGTCCCCA AAACTCCAGG GCTAAAGATA TTCAAGGCAG
  AAGAGCTCAG ACTCTGGTAT TTCCATATTA AGTCCTAAGA TGCAGCCTGG GGTACAGCGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46312441	mCV25148513	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss136391634	ENSMUSSNP3852432	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33737212					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44055027 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cbl	Casitas B-lineage lymphoma			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Mcam	melanoma cell adhesion molecule			1003 bp downstream
Rr677565	regulatory region 677565			391 bp proximal
Rr677566	regulatory region 677566			718 bp proximal
Rr677567	regulatory region 677567			811 bp proximal
Tssr89112	transcription start site region 89112			797 bp downstream
Tssr89113	transcription start site region 89113			983 bp downstream