rs33740947 SNP Detail

Summary

• ID
  rs33740947
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86346926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGCACTTCC AGGAACACGC GCGTTTCCGC CGCAGCCACC
  GCCATGGCCG ACTCAGGGAC CCACGCGGGA CCGAGCCCAC AGTTACTAGA ACCCGGACAG
  R
  GTGGGAGCAC GTGCGGCCGT AGCAGGCGGC TGGCTCCCAG GCCAAGGTAG CGCGAAGGGA
  TCCGGCGGCG GCCGTCTGTC GGCTAGAGCG CCACCTACC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46313199	mCV23664554	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss136756048	ENSMUSSNP2602449	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33740947					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86346926 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22101	CpG island 22101	within coordinates
Rr684095	regulatory region 684095	within coordinates
Rr684096	regulatory region 684096	67 bp proximal
Rr684097	regulatory region 684097	85 bp proximal
Rr684098	regulatory region 684098	1791 bp proximal
Tssr90780	transcription start site region 90780	27 bp downstream
Tssr90781	transcription start site region 90781	71 bp downstream
Ube3d	ubiquitin protein ligase E3D	within coordinates