rs33744423 SNP Detail

Summary

• ID
  rs33744423
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:15616015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTACAAA TATATGAATG
  ATAAGTATTT TTGAGTGAAA GTGAGCACAT GCTATTCAAC ATATATGGAA GGAACAGGAC
  GTTTTTCAGA AGTAAGTTGT CTCCCTTTAC TGTGGAATGG GGGGTTAAGT TAATATTGTC
  AGGCTCACAA AGCAAGTACT GTTAACTACT GAGTCATCCC ACTATCCCTG ATAAATGTGA
  K
  ATGAATCTTA GTTCTGCTCA TATGAGAGTA TATACTCATT GTTGATGCGG GAGAAATGTG
  AAGTAGTAAA ATTGTTGCTA TAAAGGATTT GCTAATAAAC TTGCTTAGGG AATAATAAGT
  TATACAATGT CAAATTTAGC TCAAGGACAG TTAGCTCTAA TACAACCAGG GGATACCGAT
  TATACTAGCA AGACTTGTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss46851841	NES10972394	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs33744423					SNP	T	T	T	G	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46851841	NES10972394	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:15616015 () rs orientation: forward

Symbol	Name	Function Class
DXMit137	DNA segment, Chr X, Massachusetts Institute of Technology 137	551 bp proximal