rs33745216 SNP Detail

Summary

• ID
  rs33745216
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:15616181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGAGTCA TCCCACTATC
  CCTGATAAAT GTGATATGAA TCTTAGTTCT GCTCATATGA GAGTATATAC TCATTGTTGA
  TGCGGGAGAA ATGTGAAGTA GTAAAATTGT TGCTATAAAG GATTTGCTAA TAAACTTGCT
  TAGGGAATAA TAAGTTATAC AATGTCAAAT TTAGCTCAAG GACAGTTAGC TCTAATACAA
  Y
  CAGGGGATAC CGATTATACT AGCAAGACTT GTTAGAAACT GTGAGAAGTA AAATCATAAT
  TAAAGTTGAG GGTTGATACA AGTTTCTGCT AATGTTTGGT GACTTATATT TACCACCAGT
  TAGGCTCCAT TTACATAACA GAATAAGACA ACCCTGATTT GGGGTTGGTT CTGGCCTACC
  CTCCTGACTC ATATGTAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46851844	NES10972395	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33745216					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46851844	NES10972395	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:15616181 () rs orientation: forward

Symbol	Name	Function Class
DXMit137	DNA segment, Chr X, Massachusetts Institute of Technology 137	385 bp proximal