rs33747235 SNP Detail

Summary

• ID
  rs33747235
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:31122608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAGGAGGAA AGCCGGGCTC CCTAGTTTGC CAGACTTGTG CAAACGACTG GGAGGCAAGG
  GAGGGCGCAG AGCGCCCCGC TGCCCTGGCG GCGCCTCCTC TCCCCGCTCC CTCGGCATCT
  CGGCCACTCG CCAGGGCTGG AGCCGCATCC CCGCTGCCAA GTCCACCTGG TCAACGACTG
  CTGCGCGCCG ACCGTCAAGG TGCGAGCCCG AAGCCCAGGC CCCCGACCGC TGCGGGCACC
  GGGGACCCGG TGCAGGCCGC CCCATTTAGA GCGCCGCGGG GCCGCAGGGC GCACGGCTGA
  R
  GCGCGCACGG CCCCGGGGGA GGGAGAGCGC GCGGTGCGGT GTCCCCGAGG ATGCGGCGGC
  GCCGCCAGCG GGTAGGGGGC TGGGGCGGCC CCGCAGCCCC GACGCCTTTC ATTTGGCCTC
  TGCGGCGACA GAGGCAGCCC GACCTCGGCG CTAAGCTCTG CGCAAAGCTG AGGCGCGCGG
  GCGGGGTGGG GGGAAGGCAA CCCGCCGCTG CGCCGAGCCT CGCGCCGCGC CCCCGGTCCC
  ACGCCCGCCC ACAGGCCGTG CTCCCGGGCG ACCGGAGGAG ACGCAGATCG GGAGCTCGCC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46313472	mCV24887041	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs33747235					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:31122608 () rs orientation: forward

Symbol	Name	Function Class
Aplp2	amyloid beta precursor-like protein 2	within coordinates
Cpgi21527	CpG island 21527	within coordinates
Gm69111	predicted gene, 69111	712 bp upstream
Rr206148	regulatory region 206148	within coordinates
Rr401293	regulatory region 401293	410 bp upstream
Tssr84218	transcription start site region 84218	22 bp upstream
Tssr88644	transcription start site region 88644	1698 bp upstream
Tssr88645	transcription start site region 88645	493 bp downstream