rs33747802 SNP Detail

Summary

• ID
  rs33747802
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131823832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTCTGGAC CTCACCAAGT AGGCTCAACT GGCTGGCCAA
  TAAGTCACAG AGGTTCAATG CTCTCTGCCT GTCCAGCACA GGCAGAGATA GTGAGCTATC
  Y
  CCTCAGCCTT CGGGGTTTTG CAATAATTCT TGAGTCTTTT CAGGGTTGTG AGGATTTTAG
  TCTAAAACCA ATAATGAGAG CAGTAGTTGC TGCCAGTTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45316936	mCV24483749	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss147615354	ENSMUSSNP2582239	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C	T
ss320508125	CHEV_2_131807648	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33747802					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131823832 () rs orientation: forward

Symbol	Name	Function Class
Rr565361	regulatory region 565361	631 bp distal
Rr565362	regulatory region 565362	614 bp proximal
Rr565363	regulatory region 565363	830 bp proximal
Rr565364	regulatory region 565364	1059 bp proximal