rs33749740 SNP Detail

Summary

• ID
  rs33749740
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:173041025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGACTTTTG AAAAAGAAGT
  GAAAAATGCA TACTGGAAAA AAAACAGCAG GTTAAACAAA GAGTGTGGGT CAAGGTGGAC
  GGCTGCATGT AGAAGAACAC AAATAGATTC GTATTCATTG CCATGCATAA AACTCAACTC
  CAAATGGATT GTAGACCTCA ACACAAAACC AGATACACTG AACCTGGTAG AAAAGAAAGC
  R
  GAGAATCGCC TTGAACACAT TGGTACAGGA GACTTTCTGG ACAGAACACC GATATATCAG
  GCACTAAGAT CAACAATTAA TAAATGGGAC CTCATGAAAC TAAAAAGCTT CCGTATTGCA
  AAGGATACCA TCATTTGGAC AAAGCAGCAG TTTACAGAGT GGGCAAAGAT TTCTTACCAA
  CTCCATATCT CATAGGGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45317992	mCV22953855	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss320621704	CHEV_2_173024733	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33749740					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:173041025 () rs orientation: forward

Symbol	Name	Function Class
Rr571893	regulatory region 571893	1626 bp proximal