rs33751082 SNP Detail

Summary

• ID
  rs33751082
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:181160786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA ACAGCTGTTT AATTGGACTT
  W
  ATGCCTGCTC AATAAGAGAG AAATC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45317637	mCV23779780	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss148401649	ENSMUSSNP2505286	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs33751082					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181160786 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12929	CpG island 12929	1185 bp proximal
Dnajc5	DnaJ heat shock protein family (Hsp40) member C5	1355 bp upstream
Gm74773	predicted gene, 74773	within coordinates
Rr573023	regulatory region 573023	635 bp proximal
Rr573024	regulatory region 573024	1358 bp proximal
Rr573025	regulatory region 573025	1426 bp proximal
Rr573026	regulatory region 573026	1965 bp proximal
Tpd52l2	tumor protein D52-like 2	1027 bp downstream
Tssr22317	transcription start site region 22317	1520 bp upstream
Tssr22318	transcription start site region 22318	1540 bp upstream
Tssr22319	transcription start site region 22319	1589 bp upstream