rs33752866 SNP Detail

Summary

• ID
  rs33752866
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:30474302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCTCTGC TCTGTCAGGT
  TACTTCTGAC AAGTGACTAA TGTGCATTTT CAATCCTTTA AACTGAGTCT GCAGAGAAAA
  GCAGGTCTAA TGATAGAAAG AAAGGGGAAG GGGATATCTA CTTGAGGCAT ATTGCAATTG
  TCAGCATCAG GCAATTGTAA CATAGACTTC TGAGATTTTT ATAGTCCTAA CCATGGTTAT
  Y
  AGGTCATAGA CCTGAGAGAT TTTATACATG AGCTACAAAA GGATTTCATC AGAAACTGTT
  CTGTCCTGAT TTAGGGAAGT AAAGAATTTT TTTTTACAGA TGCTACAGAT TAGTAAATAA
  AATAGTCAAC AATAAAAAAA TAGAATGAAT TATTAAACAT GATTTGAAGA TGTTTGAAAA
  AGAAATAATT AGCTAGGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47836719	NES11966195	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33752866					SNP	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47836719	NES11966195	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:30474302 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1419	CpG island 1419	1841 bp proximal
Rr429537	regulatory region 429537	1531 bp proximal
Trmt11	tRNA methyltransferase 11	Intron