rs33756072 SNP Detail

Summary

• ID
  rs33756072
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72713673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGC TCTGTAGGCT CCATACGGTA
  S
  CCCCCCCTCC CCCCGTTAGC CCGCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46314782	mCV23625967	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss136623963	ENSMUSSNP5918608	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss323003007	CHEV_9_72654198	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33756072					SNP	G	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72713673 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22020	CpG island 22020	342 bp proximal
Prtg	protogenin	883 bp upstream
Rr206710	regulatory region 206710	within coordinates
Tssr86048	transcription start site region 86048	741 bp upstream
Tssr86049	transcription start site region 86049	768 bp upstream
Tssr86050	transcription start site region 86050	802 bp upstream
Tssr86051	transcription start site region 86051	831 bp upstream
Tssr86052	transcription start site region 86052	910 bp upstream
Tssr86053	transcription start site region 86053	944 bp upstream