rs33757023 SNP Detail

Summary

• ID
  rs33757023
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:98308069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGA GAAGGCACAG GGAGTCCTCG
  R
  CAGTGTTATT TCTCCCAACT GATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss46315445	mCV24701836	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss136837882	ENSMUSSNP6495487	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
ss323129388	CHEV_9_98326435	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33757023					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:98308069 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22178	CpG island 22178	323 bp distal
Rbp1	retinol binding protein 1, cellular	within coordinates
Rr685258	regulatory region 685258	1364 bp proximal
Tssr2984	transcription start site region 2984	912 bp downstream
Tssr86646	transcription start site region 86646	1184 bp downstream
Tssr86647	transcription start site region 86647	1111 bp downstream
Tssr86648	transcription start site region 86648	1081 bp downstream
Tssr86649	transcription start site region 86649	1046 bp downstream
Tssr86650	transcription start site region 86650	686 bp downstream
Tssr86651	transcription start site region 86651	503 bp downstream